Computer and Biometric Services Unit International Center for Agricultural Research in the Dry Areas (ICARDA) P.O. Box 5466, Aleppo, Syria Online BioComputing Service ......... Date(D/M/Y) : 4 / 4 / 2005 Time : 8 hr 32 min Summary of the genotypic, phenotypic and environmental correlations from similar trials conducted in Randomised Complete Block Designs ..................................................................................................................... 1. Trials and parameters of the designs ................................................... No. of similar trials = 2 No. of replications = 2 No. of genotypes = 360 No. of plots in each trial = 720 Selection intensity(level) = 0.100 Variables analyzed : dh, by, gy .................................................................................... 2. Trial-wise summary ............................................................... ********** Notations ************************************ Estimate of RhoG = Genotypic correlation between X-var (X-variable) & Y-var (Y-variable) RhoP = Phenotypic correlation between X-var & Y-var RhoE = Environmental correlation between X-var & Y-var BCoeff = Coefficient vector of variables in the selection index on plot basis BCoeffMn = Coefficient vector of variables in the selection index on mean basis Alpha = intensity of selection (0 - 1) ZOrdinate = Ordinate of standard normal distribution at alpha probability (a tail area) CullNumber = number of units/plots selected MeanInd = mean of the Index obtained(plot-basis) GainInd = gain due to selection based on the calculated index values (plot-basis) GainSel = gain due to selection based on normal distribution (plot-basis) CullNumberMn = number of units/genotypes selected MeanIndMn = mean of the Index obtained (genotypes mean-basis) GainIndMn = gain due to selection based on the calculated index values (mean-basis) GainSelMn = gain due to selection based on normal distribution (mean-basis) ******************************************************************************* Trial number is = 4 ----------- Correlation estimates -------- X- var Y- var Genotypic Phenotypic Environmental dh by 0.4388 -0.0311 -0.1474 dh gy -0.6052 -0.3707 -0.2139 by gy -0.6057 0.1609 0.4252 ----------- Genotypic variance-covariance matrix -------- GCov dh 11 by 584 155566 gy -483 -56417 55777 dh by gy ----------- Phenotypic variance-covariance matrix -------- PCov dh 33 by -222 1550168 gy -730 68815 117978 dh by gy ----------- Phenotypic variance-covariance matrix on mean basis -------- PCovMn dh 17 by 383 504217 gy -544 -25109 71327 dh by gy ----------- Coefficients of the variables in the selection index -------- Weight BCoeff BCoeffMn dh -0.5000 0.6064 1.9505 by 0.7000 0.0281 0.1163 gy 1.0000 0.1274 0.2875 Alpha ZOrdinate GainSel GainSelMn 0.1000 0.1755 104.2 181.3 ***** USE SELECTION INDICES VALUES ********* Mean Minimum Maximum Plot-basis IndexMean IndexMin IndexMax 255.9 76.96 457.8 Mean-basis IndexMnMean IndexMnMin IndexMnMax 851.5 694.2 1002 Histogram of Index - 50 0 50 - 100 3 ** 100 - 150 19 ********** 150 - 200 99 ************************************************** 200 - 250 227 ****************************************************************************************************************** 250 - 300 214 *********************************************************************************************************** 300 - 350 117 *********************************************************** 350 - 400 30 *************** 400 - 450 9 ***** 450 - 2 * Scale: 1 asterisk represents 2 units. Histogram of IndexMn - 680 0 680 - 720 3 *** 720 - 760 15 *************** 760 - 800 45 ********************************************* 800 - 840 92 ******************************************************************************************** 840 - 880 96 ************************************************************************************************ 880 - 920 60 ************************************************************ 920 - 960 43 ******************************************* 960 - 1000 5 ***** 1000 - 1 * Scale: 1 asterisk represents 1 unit. ----------- Selection of individual plots ------- Order Index PlotLevel Rep Geno dh by gy 1 458 10 1 283 93.00 7467 1504 2 452 262 1 205 93.00 6133 1749 3 443 12 1 74 86.00 7533 1407 4 431 3 1 77 95.00 8133 1134 5 423 118 1 174 96.00 5600 1626 6 416 36 1 2 96.00 6800 1305 7 412 26 1 346 96.00 7467 1131 8 409 9 1 126 86.00 6533 1359 9 408 113 1 22 96.00 8000 983 10 406 200 1 59 85.00 5200 1637 11 406 20 1 302 93.00 9600 627 12 399 50 1 80 93.00 5600 1456 13 399 21 1 110 93.00 6667 1217 14 398 480 1 340 86.00 6267 1335 15 391 240 1 165 85.00 5200 1519 16 391 48 1 308 93.00 6533 1185 17 386 14 1 79 93.00 6800 1085 18 383 681 1 256 93.00 5867 1273 19 383 33 1 233 99.00 3600 1743 20 383 201 1 111 96.00 4933 1461 21 381 1 1 293 86.00 8333 742 22 380 678 1 231 96.00 5200 1377 23 376 52 1 194 85.00 5600 1309 24 374 89 1 99 86.00 6667 1056 25 371 371 1 52 93.00 7067 913 26 370 398 1 30 85.00 6400 1090 27 370 119 1 316 85.00 5200 1353 28 369 218 1 274 103.00 5600 1174 29 369 408 1 238 96.00 6400 1027 30 369 208 1 167 85.00 4800 1431 31 368 195 1 42 85.00 5333 1310 32 365 15 1 113 71.00 6267 1142 33 364 299 1 252 93.00 6400 1002 34 361 72 1 326 93.00 5333 1211 35 359 697 1 202 93.00 5200 1225 36 357 23 1 58 82.00 5467 1202 37 355 120 1 276 98.00 8267 495 38 354 351 1 358 93.00 4800 1277 39 353 125 1 183 85.00 4533 1368 40 352 435 1 210 107.00 9333 196 41 350 390 1 157 86.00 10133 107 42 350 39 1 228 85.00 4667 1313 43 350 198 1 155 93.00 4400 1333 44 349 55 1 273 93.00 5333 1124 45 347 248 1 232 96.00 7467 623 46 345 691 1 63 84.00 5333 1130 47 345 138 1 45 96.00 4400 1278 48 345 47 1 328 93.00 4600 1247 49 344 370 1 91 107.00 9067 191 50 343 214 1 208 103.00 4800 1146 51 343 17 1 251 93.00 5333 1073 52 343 400 1 1 93.00 5867 955 53 343 151 1 314 93.00 4267 1305 54 342 314 1 156 86.00 4000 1394 55 342 272 1 204 93.00 4000 1356 56 339 301 1 46 93.00 5333 1043 57 338 433 1 305 85.00 5600 1014 58 338 701 1 280 85.00 5200 1102 59 338 607 1 349 93.00 4933 1119 60 337 188 1 48 93.00 4267 1258 61 336 4 1 138 86.00 7000 687 62 335 365 1 277 107.00 9600 0 63 335 615 1 68 86.00 5333 1040 64 334 679 1 169 85.00 5600 978 65 333 287 1 25 96.00 4000 1275 66 332 576 1 217 93.00 5067 1046 67 331 331 1 164 93.00 4000 1275 68 331 303 1 354 96.00 4800 1084 69 331 42 1 334 93.00 4933 1068 70 331 6 1 62 96.00 4867 1067 71 330 289 1 90 101.00 4267 1170 72 330 323 1 333 93.00 4000 1266 Alpha CullNumber MeanInd GainInd GainSel 0.1000 72.00 255.9 110.1 104.2 --------Selection using BLUPs i.e. genotypes means ----- OrderMn IndexMn GenoNumber dh by gy 1 1002 59 93.10 4441 1056.6 2 992 23 91.30 4319 1083.9 3 981 319 92.07 4332 1035.1 4 971 37 88.98 4283 1038.9 5 966 340 93.10 4453 925.6 6 962 252 95.42 4076 1049.2 7 959 263 95.94 4198 987.2 8 959 194 88.20 4283 1004.6 9 955 58 93.87 4417 896.4 10 955 193 89.49 4295 974.7 11 954 2 93.87 4484 867.8 12 954 10 93.10 4210 981.8 13 951 3 89.49 4453 899.9 14 947 213 93.87 4186 962.8 15 945 296 95.68 4198 938.8 16 945 220 91.81 4271 934.9 17 944 80 92.07 4386 884.2 18 943 242 93.87 4149 965.4 19 943 228 91.04 4356 900.6 20 943 30 91.81 4526 824.8 21 942 79 93.10 4271 916.6 22 942 226 91.04 4161 974.4 23 942 266 93.10 4198 945.5 24 942 333 91.30 4307 912.5 25 939 57 93.10 4161 951.9 26 939 253 95.16 4234 908.3 27 938 297 88.98 4174 971.2 28 937 185 93.10 4271 899.6 29 937 19 91.04 4234 926.9 30 935 27 91.30 4295 895.4 31 934 53 93.87 4295 874.6 32 932 208 93.10 4210 905.4 33 931 183 91.04 4137 946.2 34 929 223 94.65 4161 906.4 35 929 267 88.72 4307 887.1 36 929 90 93.10 4271 869.8 Alpha CullNumberMn MeanIndMn GainIndMn GainSelMn 0.1000 36.00 851.5 97.11 181.3 Trial number is = 5 ----------- Correlation estimates -------- X- var Y- var Genotypic Phenotypic Environmental dh by 0.4388 -0.0311 -0.1474 dh gy -0.6052 -0.3707 -0.2139 by gy -0.6057 0.1609 0.4252 ----------- Genotypic variance-covariance matrix -------- GCov dh 11 by 584 155566 gy -483 -56417 55777 dh by gy ----------- Phenotypic variance-covariance matrix -------- PCov dh 33 by -222 1550168 gy -730 68815 117978 dh by gy ----------- Phenotypic variance-covariance matrix on mean basis -------- PCovMn dh 17 by 383 504217 gy -544 -25109 71327 dh by gy ----------- Coefficients of the variables in the selection index -------- Weight BCoeff BCoeffMn dh -0.5000 0.6064 1.9505 by 0.7000 0.0281 0.1163 gy 1.0000 0.1274 0.2875 Alpha ZOrdinate GainSel GainSelMn 0.1000 0.1755 104.2 181.3 ***** USE SELECTION INDICES VALUES ********* Mean Minimum Maximum Plot-basis IndexMean IndexMin IndexMax 255.9 76.96 457.8 Mean-basis IndexMnMean IndexMnMin IndexMnMax 851.5 694.2 1002 Histogram of Index - 50 0 50 - 100 3 ** 100 - 150 19 ********** 150 - 200 99 ************************************************** 200 - 250 227 ****************************************************************************************************************** 250 - 300 214 *********************************************************************************************************** 300 - 350 117 *********************************************************** 350 - 400 30 *************** 400 - 450 9 ***** 450 - 2 * Scale: 1 asterisk represents 2 units. Histogram of IndexMn - 680 0 680 - 720 3 *** 720 - 760 15 *************** 760 - 800 45 ********************************************* 800 - 840 92 ******************************************************************************************** 840 - 880 96 ************************************************************************************************ 880 - 920 60 ************************************************************ 920 - 960 43 ******************************************* 960 - 1000 5 ***** 1000 - 1 * Scale: 1 asterisk represents 1 unit. ----------- Selection of individual plots ------- Order Index PlotLevel Rep Geno dh by gy 1 458 10 1 283 93.00 7467 1504 2 452 262 1 205 93.00 6133 1749 3 443 12 1 74 86.00 7533 1407 4 431 3 1 77 95.00 8133 1134 5 423 118 1 174 96.00 5600 1626 6 416 36 1 2 96.00 6800 1305 7 412 26 1 346 96.00 7467 1131 8 409 9 1 126 86.00 6533 1359 9 408 113 1 22 96.00 8000 983 10 406 200 1 59 85.00 5200 1637 11 406 20 1 302 93.00 9600 627 12 399 50 1 80 93.00 5600 1456 13 399 21 1 110 93.00 6667 1217 14 398 480 1 340 86.00 6267 1335 15 391 240 1 165 85.00 5200 1519 16 391 48 1 308 93.00 6533 1185 17 386 14 1 79 93.00 6800 1085 18 383 681 1 256 93.00 5867 1273 19 383 33 1 233 99.00 3600 1743 20 383 201 1 111 96.00 4933 1461 21 381 1 1 293 86.00 8333 742 22 380 678 1 231 96.00 5200 1377 23 376 52 1 194 85.00 5600 1309 24 374 89 1 99 86.00 6667 1056 25 371 371 1 52 93.00 7067 913 26 370 398 1 30 85.00 6400 1090 27 370 119 1 316 85.00 5200 1353 28 369 218 1 274 103.00 5600 1174 29 369 408 1 238 96.00 6400 1027 30 369 208 1 167 85.00 4800 1431 31 368 195 1 42 85.00 5333 1310 32 365 15 1 113 71.00 6267 1142 33 364 299 1 252 93.00 6400 1002 34 361 72 1 326 93.00 5333 1211 35 359 697 1 202 93.00 5200 1225 36 357 23 1 58 82.00 5467 1202 37 355 120 1 276 98.00 8267 495 38 354 351 1 358 93.00 4800 1277 39 353 125 1 183 85.00 4533 1368 40 352 435 1 210 107.00 9333 196 41 350 390 1 157 86.00 10133 107 42 350 39 1 228 85.00 4667 1313 43 350 198 1 155 93.00 4400 1333 44 349 55 1 273 93.00 5333 1124 45 347 248 1 232 96.00 7467 623 46 345 691 1 63 84.00 5333 1130 47 345 138 1 45 96.00 4400 1278 48 345 47 1 328 93.00 4600 1247 49 344 370 1 91 107.00 9067 191 50 343 214 1 208 103.00 4800 1146 51 343 17 1 251 93.00 5333 1073 52 343 400 1 1 93.00 5867 955 53 343 151 1 314 93.00 4267 1305 54 342 314 1 156 86.00 4000 1394 55 342 272 1 204 93.00 4000 1356 56 339 301 1 46 93.00 5333 1043 57 338 433 1 305 85.00 5600 1014 58 338 701 1 280 85.00 5200 1102 59 338 607 1 349 93.00 4933 1119 60 337 188 1 48 93.00 4267 1258 61 336 4 1 138 86.00 7000 687 62 335 365 1 277 107.00 9600 0 63 335 615 1 68 86.00 5333 1040 64 334 679 1 169 85.00 5600 978 65 333 287 1 25 96.00 4000 1275 66 332 576 1 217 93.00 5067 1046 67 331 331 1 164 93.00 4000 1275 68 331 303 1 354 96.00 4800 1084 69 331 42 1 334 93.00 4933 1068 70 331 6 1 62 96.00 4867 1067 71 330 289 1 90 101.00 4267 1170 72 330 323 1 333 93.00 4000 1266 Alpha CullNumber MeanInd GainInd GainSel 0.1000 72.00 255.9 110.1 104.2 --------Selection using BLUPs i.e. genotypes means ----- OrderMn IndexMn GenoNumber dh by gy 1 1002 59 93.10 4441 1056.6 2 992 23 91.30 4319 1083.9 3 981 319 92.07 4332 1035.1 4 971 37 88.98 4283 1038.9 5 966 340 93.10 4453 925.6 6 962 252 95.42 4076 1049.2 7 959 263 95.94 4198 987.2 8 959 194 88.20 4283 1004.6 9 955 58 93.87 4417 896.4 10 955 193 89.49 4295 974.7 11 954 2 93.87 4484 867.8 12 954 10 93.10 4210 981.8 13 951 3 89.49 4453 899.9 14 947 213 93.87 4186 962.8 15 945 296 95.68 4198 938.8 16 945 220 91.81 4271 934.9 17 944 80 92.07 4386 884.2 18 943 242 93.87 4149 965.4 19 943 228 91.04 4356 900.6 20 943 30 91.81 4526 824.8 21 942 79 93.10 4271 916.6 22 942 226 91.04 4161 974.4 23 942 266 93.10 4198 945.5 24 942 333 91.30 4307 912.5 25 939 57 93.10 4161 951.9 26 939 253 95.16 4234 908.3 27 938 297 88.98 4174 971.2 28 937 185 93.10 4271 899.6 29 937 19 91.04 4234 926.9 30 935 27 91.30 4295 895.4 31 934 53 93.87 4295 874.6 32 932 208 93.10 4210 905.4 33 931 183 91.04 4137 946.2 34 929 223 94.65 4161 906.4 35 929 267 88.72 4307 887.1 36 929 90 93.10 4271 869.8 Alpha CullNumberMn MeanIndMn GainIndMn GainSelMn 0.1000 36.00 851.5 97.11 181.3